| SV Wehen | Kieler SV Holstein | |||
| VfL Osnabrück | SV Stuttgarter Kickers | |||
| 1. FSV Mainz 05 II | SG Dynamo Dresden | |||
| Chemnitzer FC | VfB Stuttgart II | |||
| DSC Arminia Bielefeld | FC Hansa Rostock | |||
| SC Fortuna Köln | Borussia Dortmund II | |||
| MSV Duisburg | SpVgg Unterhaching | |||
| SSV Jahn Regensburg | FC Rot-Weiß Erfurt | |||
| SG Sonnenhof Großaspach | SC Preußen Münster | |||
| Hallescher FC | FC Energie Cottbus |
| 1 | DSC Arminia Bielefeld | 29 18 05 06 60 - 31 59 |
| 2 | Kieler SV Holstein | 29 14 10 05 39 - 19 52 |
| 3 | SC Preußen Münster | 29 14 08 07 44 - 32 50 |
| 4 | MSV Duisburg | 29 13 10 06 43 - 31 49 |
| 5 | SV Stuttgarter Kickers | 29 13 10 06 47 - 36 49 |
| 6 | FC Energie Cottbus | 29 13 08 08 37 - 32 47 |
| 7 | FC Rot-Weiß Erfurt | 29 13 07 09 41 - 38 46 |
| 8 | SV Wehen | 29 12 06 11 44 - 34 42 |
| 9 | SG Dynamo Dresden | 29 11 08 10 34 - 33 41 |
| 10 | Hallescher FC | 29 11 07 11 37 - 38 40 |
| 11 | Chemnitzer FC | 29 11 06 12 28 - 27 39 |
| 12 | VfL Osnabrück | 29 11 06 12 42 - 45 39 |
| 13 | SC Fortuna Köln | 29 10 08 11 32 - 29 38 |
| 14 | VfB Stuttgart II | 29 09 07 13 36 - 44 34 |
| 15 | SpVgg Unterhaching | 29 08 07 14 40 - 52 31 |
| 16 | FC Hansa Rostock | 29 08 07 14 40 - 55 31 |
| 17 | SG Sonnenhof Großaspach | 29 07 09 13 30 - 51 30 |
| 18 | 1. FSV Mainz 05 II | 29 07 07 15 31 - 44 28 |
| 19 | Borussia Dortmund II | 29 04 14 11 27 - 37 26 |
| 20 | SSV Jahn Regensburg | 29 06 04 19 32 - 56 22 |