| FC Rot-Weiß Erfurt | SV Wehen | |||
| Kieler SV Holstein | VfL Osnabrück | |||
| FC Energie Cottbus | 1. FSV Mainz 05 II | |||
| SG Dynamo Dresden | SG Sonnenhof Großaspach | |||
| SC Preußen Münster | SSV Jahn Regensburg | |||
| SV Stuttgarter Kickers | MSV Duisburg | |||
| SpVgg Unterhaching | SC Fortuna Köln | |||
| Borussia Dortmund II | DSC Arminia Bielefeld | |||
| VfB Stuttgart II | Hallescher FC | |||
| FC Hansa Rostock | Chemnitzer FC |
| 1 | DSC Arminia Bielefeld | 28 17 05 06 57 - 29 56 |
| 2 | Kieler SV Holstein | 28 13 10 05 38 - 19 49 |
| 3 | SV Stuttgarter Kickers | 28 13 10 05 46 - 32 49 |
| 4 | SC Preußen Münster | 28 14 07 07 43 - 31 49 |
| 5 | FC Energie Cottbus | 28 13 08 07 36 - 29 47 |
| 6 | MSV Duisburg | 28 12 10 06 42 - 31 46 |
| 7 | FC Rot-Weiß Erfurt | 28 13 07 08 41 - 37 46 |
| 8 | SV Wehen | 28 12 06 10 44 - 33 42 |
| 9 | SG Dynamo Dresden | 28 11 08 09 34 - 32 41 |
| 10 | SC Fortuna Köln | 28 10 07 11 32 - 29 37 |
| 11 | Hallescher FC | 28 10 07 11 34 - 37 37 |
| 12 | Chemnitzer FC | 28 10 06 12 27 - 27 36 |
| 13 | VfL Osnabrück | 28 10 06 12 38 - 44 36 |
| 14 | VfB Stuttgart II | 28 09 07 12 36 - 43 34 |
| 15 | SpVgg Unterhaching | 28 08 07 13 40 - 51 31 |
| 16 | FC Hansa Rostock | 28 08 07 13 38 - 52 31 |
| 17 | SG Sonnenhof Großaspach | 28 07 08 13 29 - 50 29 |
| 18 | Borussia Dortmund II | 28 04 13 11 27 - 37 25 |
| 19 | 1. FSV Mainz 05 II | 28 06 07 15 30 - 44 25 |
| 20 | SSV Jahn Regensburg | 28 05 04 19 31 - 56 19 |